{ "_id": "6a1f0b79b401979e7341c795", "Type": "Package", "Package": "gleam", "Title": "Global Livestock Environmental Assessment Model (GLEAM-X)", "Version": "0.8.0", "Authors@R": "c(\nperson(given = \"Ahmed\",\nfamily = \"Jou\",\nemail = \"ahmed@applitics.fr\",\nrole = c(\"aut\", \"cre\"),\ncomment = c(ORCID = \"0009-0002-2309-4583\",\n\"https://applitics.fr\")),\nperson(given = \"Yassine\",\nfamily = \"Elaouni\",\nemail = \"yassine@applitics.fr\",\nrole = c(\"aut\"),\ncomment = \"https://applitics.fr\"),\nperson(given = \"Dominik\",\nfamily = \"Wisser\",\nemail = \"dominik.wisser@fao.org\",\nrole = c(\"aut\"),\ncomment = c(ORCID = \"0000-0001-8368-3801\",\n\"GLEAM team lead, FAO\")),\nperson(given = \"Lydia\",\nfamily = \"Lanzoni\",\nemail = \"lydia.lanzoni@fao.org\",\nrole = c(\"aut\"),\ncomment = c(ORCID = \"0000-0002-4488-4368\",\n\"Livestock and climate change specialist, FAO\")),\nperson(given = \"Giuseppe\",\nfamily = \"Tempio\",\nemail = \"giuseppe.tempio@fao.org\",\nrole = c(\"aut\"),\ncomment = c(ORCID = \"0009-0004-2272-0794\",\n\"Livestock environmental impact analyst, FAO\")),\nperson(given = \"Phyllis\",\nfamily = \"Ndungu'\",\nemail = \"Phyllis.Ndungu@fao.org\",\nrole = c(\"ctb\"),\ncomment = \"Livestock and climate change specialist, FAO\"),\nperson(given = \"Yushan\",\nfamily = \"Li\",\nemail = \"Yushan.Li@fao.org\",\nrole = c(\"ctb\"),\ncomment = \"Livestock and sustainability specialist, FAO\"),\nperson(given = \"Manling\",\nfamily = \"Xu\",\nemail = \"Manling.Xu@fao.org\",\nrole = c(\"ctb\"),\ncomment = \"Livestock data intern, FAO\"),\nperson(given = \"Zixin\",\nfamily = \"Wang\",\nemail = \"Zixin.Wang@fao.org\",\nrole = c(\"ctb\"),\ncomment = \"Livestock data intern, FAO\"),\nperson(given = \"Narindra\",\nfamily = \"Rakotovao\",\nemail = \"Narindra.Rakotovao@fao.org\",\nrole = c(\"ctb\"),\ncomment = \"Livestock policy officer, FAO\"),\nperson(given = \"Stewart\",\nfamily = \"Chikoloma\",\nemail = \"Stewart.Chikomola@fao.org\",\nrole = c(\"ctb\"),\ncomment= \"Livestock data specialist, FAO\"),\nperson(given = \"David\",\nfamily = \"OBrien\",\nemail = \"david@applitics.fr\",\nrole = c(\"ctb\"),\ncomment = c(ORCID = \"0009-0007-0339-0517\",\n\"https://applitics.fr\")),\nperson(given = \"Food and Agriculture Organization of the United Nations\",\nfamily = \"FAO\",\nrole = c(\"cph\"),\ncomment = \"Original GLEAM model framework\"),\nperson(given = \"Federal Ministry of Agriculture, Food and Regional Identity of Germany\",\nfamily = \"BMELH\",\nrole = c( \"fnd\"),\ncomment = \"Funding support\"))", "Description": "GLEAM-X is the official R implementation of FAO’s Global\nLivestock Environmental Assessment Model (GLEAM). The package\nprovides a modular, transparent framework for simulating\nlivestock production systems and quantifying their\nenvironmental impacts.", "License": "AGPL-3", "URL": "https://github.com/un-fao/GLEAM/, https://www.fao.org/gleam/en/", "BugReports": "https://github.com/un-fao/GLEAM/issues", "Encoding": "UTF-8", "Roxygen": "list(markdown = TRUE)", "RoxygenNote": "7.3.3", "VignetteBuilder": "knitr", "Config/testthat/edition": "3", "Repository": "https://un-fao.r-universe.dev", "Date/Publication": "2026-05-14 15:43:03 UTC", "RemoteUrl": "https://github.com/un-fao/gleam", "RemoteRef": "HEAD", "RemoteSha": "90e416197e89093c4f3a347b263ba805d33d4aac", "NeedsCompilation": "no", "Packaged": { "Date": "2026-05-17 09:52:53 UTC", "User": "root" }, "Author": "Ahmed Jou [aut, cre] (ORCID: ,\nhttps://applitics.fr),\nYassine Elaouni [aut] (https://applitics.fr),\nDominik Wisser [aut] (ORCID: ,\nGLEAM team lead, FAO),\nLydia Lanzoni [aut] (ORCID: ,\nLivestock and climate change specialist, FAO),\nGiuseppe Tempio [aut] (ORCID: ,\nLivestock environmental impact analyst, FAO),\nPhyllis Ndungu' [ctb] (Livestock and climate change specialist, FAO),\nYushan Li [ctb] (Livestock and sustainability specialist, FAO),\nManling Xu [ctb] (Livestock data intern, FAO),\nZixin Wang [ctb] (Livestock data intern, FAO),\nNarindra Rakotovao [ctb] (Livestock policy officer, FAO),\nStewart Chikoloma [ctb] (Livestock data specialist, FAO),\nDavid OBrien [ctb] (ORCID: ,\nhttps://applitics.fr),\nFood and Agriculture Organization of the United Nations FAO [cph]\n(Original GLEAM model framework),\nFederal Ministry of Agriculture, Food and Regional Identity of Germany\nBMELH [fnd] (Funding support)", "Maintainer": "Ahmed Jou ", "MD5sum": "d0d920cac86d96e44008908aab67dfb3", "_user": "un-fao", "_type": "src", "_file": "gleam_0.8.0.tar.gz", "_fileid": "40cdb04bac44d921fb2be49d6708d656ccf67b36afdcbe742047d9e4a5d7b927", "_filesize": 18853158, "_sha256": 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"date": "2026-04-16" } ], "_exports": [ "assign_allocation_shares", "calc_allocated_emissions", "calc_allocation_shares", "calc_avg_weights", "calc_ch4_enteric", "calc_ch4_manure", "calc_ch4_ration_rice", "calc_co2_ration_crop_activities", "calc_co2_ration_fertilizer", "calc_co2_ration_luc_nopeat", "calc_co2_ration_luc_peat", "calc_co2_ration_pesticides", "calc_co2eq", "calc_cohort_to_herd_aggregation", "calc_cohort_totals", "calc_cohort_weights", "calc_conversion_factor_ym", "calc_daily_weight_gain", "calc_fecundity_rates", "calc_feed_digestibility_fraction", "calc_fibre_allocation_energy", "calc_fibre_production", "calc_meat_allocation_energy", "calc_meat_production", "calc_metabolic_energy_req_activity", "calc_metabolic_energy_req_fibre", "calc_metabolic_energy_req_growth", "calc_metabolic_energy_req_lactation", "calc_metabolic_energy_req_maintenance", "calc_metabolic_energy_req_pregnancy", "calc_metabolic_energy_req_work", "calc_milk_allocation_energy", "calc_milk_production", "calc_n2o_manure_direct", "calc_n2o_manure_leaching", "calc_n2o_manure_total", "calc_n2o_manure_volatilization", "calc_n2o_ration_crop_residues", "calc_n2o_ration_fertilizer", "calc_n2o_ration_manure", "calc_nitrogen_excretion", "calc_nitrogen_intake", "calc_nitrogen_retention", "calc_projected_population_size", "calc_ration_ash", "calc_ration_digestibility", "calc_ration_gross_energy", "calc_ration_intake", "calc_ration_metabolizable_energy", "calc_ration_nitrogen_content", "calc_ration_urinary_energy_fraction", "calc_reg_growth", "calc_rem_maintenance", "calc_steady_state_structure", "calc_summary_offtake", "calc_total_metabolic_energy_req", "calc_transition_probabilities", "calc_volatile_solids", "calc_work_allocation_energy", "run_aggregation_module", "run_allocation_module", "run_demographic_herd_module", "run_emissions_enteric_module", "run_emissions_manure_module", "run_emissions_ration_module", "run_gleam", "run_metabolic_energy_req_module", "run_nitrogen_balance_module", "run_production_module", "run_ration_quality_module", "run_weights_module" ], "_help": [ { "page": "assign_allocation_shares", "title": "Assign allocation shares to emission variables by commodity", "topics": [ "assign_allocation_shares" ] }, { "page": "calc_allocated_emissions", "title": "Calculate allocated greenhouse gas emissions (GHG)", "topics": [ "calc_allocated_emissions" ] }, { "page": "calc_allocation_shares", "title": "Calculate allocation shares for livestock commodities", "topics": [ "calc_allocation_shares" ] }, { "page": "calc_avg_weights", "title": "Calculate average and final live weights by cohort", "topics": [ "calc_avg_weights" ] }, { "page": "calc_ch4_enteric", "title": "Calculate daily enteric methane emissions", "topics": [ "calc_ch4_enteric" ] }, { "page": "calc_ch4_manure", "title": "Calculate methane (CH4) emissions from manure management systems", "topics": [ "calc_ch4_manure" ] }, { "page": "calc_ch4_ration_rice", "title": "Calculate a ration component's contribution to methane (CH4) emissions from rice cultivation", "topics": [ "calc_ch4_ration_rice" ] }, { "page": "calc_co2_ration_crop_activities", "title": "Calculate a ration component's contribution to carbon dioxide (CO2) emissions from on-field agricultural activities", "topics": [ "calc_co2_ration_crop_activities" ] }, { "page": "calc_co2_ration_fertilizer", "title": "Calculate a ration component's contribution to carbon dioxide (CO2) emissions from fertilizer manufacture", "topics": [ "calc_co2_ration_fertilizer" ] }, { "page": "calc_co2_ration_luc_nopeat", "title": "Calculate a ration component's contribution to carbon dioxide (CO2) emissions from land-use change (excluding peatland drainage)", "topics": [ "calc_co2_ration_luc_nopeat" ] }, { "page": "calc_co2_ration_luc_peat", "title": "Calculate a ration component's contribution to carbon dioxide (CO2) emissions from peatland drainage", "topics": [ "calc_co2_ration_luc_peat" ] }, { "page": "calc_co2_ration_pesticides", "title": "Calculate a ration component's contribution to carbon dioxide (CO2) emissions from pesticide manufacture", "topics": [ "calc_co2_ration_pesticides" ] }, { "page": "calc_co2eq", "title": "Convert methane (CH4) and nitrous oxide (N2O) emissions to CO2-equivalents (CO2eq) using Global Warming Potentials (GWP) factors", "topics": [ "calc_co2eq" ] }, { "page": "calc_cohort_to_herd_aggregation", "title": "Aggregate cohort-level to herd-level data", "topics": [ "calc_cohort_to_herd_aggregation" ] }, { "page": "calc_cohort_totals", "title": "Calculate totals by cohort", "topics": [ "calc_cohort_totals" ] }, { "page": "calc_cohort_weights", "title": "Calculate live weights by cohort and life stage", "topics": [ "calc_cohort_weights" ] }, { "page": "calc_conversion_factor_ym", "title": "Calculate methane conversion factor (ym)", "topics": [ "calc_conversion_factor_ym" ] }, { "page": "calc_daily_weight_gain", "title": "Calculate daily weight gain by cohort", "topics": [ "calc_daily_weight_gain" ] }, { "page": "calc_fecundity_rates", "title": "Calculate daily fecundity rates", "topics": [ "calc_fecundity_rates" ] }, { "page": "calc_feed_digestibility_fraction", "title": "Calculate feed digestibility fraction", "topics": [ "calc_feed_digestibility_fraction" ] }, { "page": "calc_fibre_allocation_energy", "title": "Calculate fibre energy requirements (for biophysical allocation)", "topics": [ "calc_fibre_allocation_energy" ] }, { "page": "calc_fibre_production", "title": "Calculate fibre production", "topics": [ "calc_fibre_production" ] }, { "page": "calc_meat_allocation_energy", "title": "Calculate meat energy requirements (for biophysical allocation)", "topics": [ "calc_meat_allocation_energy" ] }, { "page": "calc_meat_production", "title": "Calculate meat production", "topics": [ "calc_meat_production" ] }, { "page": "calc_metabolic_energy_req_activity", "title": "Calculate metabolic energy requirements for activity", "topics": [ "calc_metabolic_energy_req_activity" ] }, { "page": "calc_metabolic_energy_req_fibre", "title": "Calculate metabolic energy requirements for fibre production", "topics": [ "calc_metabolic_energy_req_fibre" ] }, { "page": "calc_metabolic_energy_req_growth", "title": "Calculate metabolic energy requirements for growth", "topics": [ "calc_metabolic_energy_req_growth" ] }, { "page": "calc_metabolic_energy_req_lactation", "title": "Calculate metabolic energy requirements for lactation", "topics": [ "calc_metabolic_energy_req_lactation" ] }, { "page": "calc_metabolic_energy_req_maintenance", "title": "Calculate metabolic energy requirements for maintenance", "topics": [ "calc_metabolic_energy_req_maintenance" ] }, { "page": "calc_metabolic_energy_req_pregnancy", "title": "Calculate metabolic energy requirements for pregnancy", "topics": [ "calc_metabolic_energy_req_pregnancy" ] }, { "page": "calc_metabolic_energy_req_work", "title": "Calculate metabolic energy requirements for work", "topics": [ "calc_metabolic_energy_req_work" ] }, { "page": "calc_milk_allocation_energy", "title": "Calculate milk energy requirements (for biophysical allocation)", "topics": [ "calc_milk_allocation_energy" ] }, { "page": "calc_milk_production", "title": "Calculate milk production", "topics": [ "calc_milk_production" ] }, { "page": "calc_n2o_manure_direct", "title": "Calculate direct Nitrous Oxide (N2O) emissions from manure management systems", "topics": [ "calc_n2o_manure_direct" ] }, { "page": "calc_n2o_manure_leaching", "title": "Calculate indirect Nitrous Oxide (N2O) emissions from manure leaching and runoff", "topics": [ "calc_n2o_manure_leaching" ] }, { "page": "calc_n2o_manure_total", "title": "Calculate total Nitrous Oxide (N2O) emissions from manure", "topics": [ "calc_n2o_manure_total" ] }, { "page": "calc_n2o_manure_volatilization", "title": "Calculate indirect Nitrous Oxide (N2O) emissions from manure volatilization", "topics": [ "calc_n2o_manure_volatilization" ] }, { "page": "calc_n2o_ration_crop_residues", "title": "Calculate a ration component's contribution to nitrous oxide (N2O) emissions from crop residues decomposition", "topics": [ "calc_n2o_ration_crop_residues" ] }, { "page": "calc_n2o_ration_fertilizer", "title": "Calculate a ration component's contribution to nitrous oxide (N2O) emissions from fertilizer use", "topics": [ "calc_n2o_ration_fertilizer" ] }, { "page": "calc_n2o_ration_manure", "title": "Calculate a ration component's contribution to nitrous oxide (N2O) emissions from manure application and deposition", "topics": [ "calc_n2o_ration_manure" ] }, { "page": "calc_nitrogen_excretion", "title": "Calculate daily nitrogen excretion", "topics": [ "calc_nitrogen_excretion" ] }, { "page": "calc_nitrogen_intake", "title": "Calculate daily nitrogen intake", "topics": [ "calc_nitrogen_intake" ] }, { "page": "calc_nitrogen_retention", "title": "Calculate daily nitrogen retention", "topics": [ "calc_nitrogen_retention" ] }, { "page": "calc_projected_population_size", "title": "Calculate one year of steady-state population dynamics", "topics": [ "calc_projected_population_size" ] }, { "page": "calc_ration_ash", "title": "Calculate diet ash contribution for a ration component", "topics": [ "calc_ration_ash" ] }, { "page": "calc_ration_digestibility", "title": "Calculate diet digestibility contribution for a ration component", "topics": [ "calc_ration_digestibility" ] }, { "page": "calc_ration_gross_energy", "title": "Calculate diet gross energy contribution for a ration component", "topics": [ "calc_ration_gross_energy" ] }, { "page": "calc_ration_intake", "title": "Calculate daily ration intake in dry matter", "topics": [ "calc_ration_intake" ] }, { "page": "calc_ration_metabolizable_energy", "title": "Calculate diet metabolizable energy contribution for a ration component", "topics": [ "calc_ration_metabolizable_energy" ] }, { "page": "calc_ration_nitrogen_content", "title": "Calculate diet nitrogen contribution for a ration component", "topics": [ "calc_ration_nitrogen_content" ] }, { "page": "calc_ration_urinary_energy_fraction", "title": "Calculate urinary energy fraction contribution for a ration component", "topics": [ "calc_ration_urinary_energy_fraction" ] }, { "page": "calc_reg_growth", "title": "Calculate the ratio of net energy available for growth in the diet (REG – Net Energy for Growth / Digestible Energy)", "topics": [ "calc_reg_growth" ] }, { "page": "calc_rem_maintenance", "title": "Calculate ratio of net energy available for maintenance in the diet (REM - Net Energy for Maintenance / Digestible Energy)", "topics": [ "calc_rem_maintenance" ] }, { "page": "calc_steady_state_structure", "title": "Calculate steady-state population structure", "topics": [ "calc_steady_state_structure" ] }, { "page": "calc_summary_offtake", "title": "Summarise offtake and stock Variation for a steady-state year", "topics": [ "calc_summary_offtake" ] }, { "page": "calc_total_metabolic_energy_req", "title": "Calculate total metabolic energy requirements", "topics": [ "calc_total_metabolic_energy_req" ] }, { "page": "calc_transition_probabilities", "title": "Calculate transition probabilities for sex-age classes", "topics": [ "calc_transition_probabilities" ] }, { "page": "calc_volatile_solids", "title": "Calculate Volatile Solids (VS)", "topics": [ "calc_volatile_solids" ] }, { "page": "calc_work_allocation_energy", "title": "Calculate work energy requirements (for biophysical allocation)", "topics": [ "calc_work_allocation_energy" ] }, { "page": "run_aggregation_module", "title": "Run Aggregation Module Pipeline", "topics": [ "run_aggregation_module" ] }, { "page": "run_allocation_module", "title": "Run Allocation Module Pipeline", "topics": [ "run_allocation_module" ] }, { "page": "run_demographic_herd_module", "title": "Run Demographic Herd Module Pipeline", "topics": [ "run_demographic_herd_module" ] }, { "page": "run_emissions_enteric_module", "title": "Run Enteric Methane (CH4) Emissions Module Pipeline", "topics": [ "run_emissions_enteric_module" ] }, { "page": "run_emissions_manure_module", "title": "Run Emissions from Manure Module Pipeline", "topics": [ "run_emissions_manure_module" ] }, { "page": "run_emissions_ration_module", "title": "Run Emissions from Feed Production Module Pipeline", "topics": [ "run_emissions_ration_module" ] }, { "page": "run_gleam", "title": "Run the full Global Livestock Environmental Assessment Model (GLEAM) Pipeline", "topics": [ "run_gleam" ] }, { "page": "run_metabolic_energy_req_module", "title": "Run Metabolic Energy Requirements and Dry Matter Intake Module Pipeline", "topics": [ "run_metabolic_energy_req_module" ] }, { "page": "run_nitrogen_balance_module", "title": "Run Nitrogen Balance Module Pipeline", "topics": [ "run_nitrogen_balance_module" ] }, { "page": "run_production_module", "title": "Run Production Module Pipeline", "topics": [ "run_production_module" ] }, { "page": "run_ration_quality_module", "title": 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